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Contents of /random/boxshade.kaptn

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Revision 1.3 - (show annotations) (download)
Wed Jul 25 13:44:48 2007 UTC (10 years, 4 months ago) by nieder
Branch: MAIN
CVS Tags: HEAD
Changes since 1.2: +24 -11 lines
add output files and more fixes

1 #!/sw/bin/kaptain
2
3 start "boxshade" -> boxshade buttons;
4
5 boxshade -> "boxshade " input_name " " output_name " " opts;
6 opts:framed :horizontal -> input_opts output_opts ;
7
8 input_name "Alignment file" -> "-in="@infile;
9 output_name "Output shaded file" -> "-out="@outfile;
10
11 input_opts "Input Options" -> thr " " in_types;
12
13 thr "Similarity threshold (0-1.0)" -> "-thr="@float="0.5";
14
15 in_types "Input file type" -> MSF | ! CLUSTAL | MALIGNED | ESEE | PHYLIP;
16 MSF "MSF" -> "-type=MSF ";
17 CLUSTAL "CLUSTAL" -> "-type=CLUSTAL ";
18 MALIGNED "MALIGNED" -> "-type=MALIGNED ";
19 ESEE "ESEE" -> "-type=ESEE ";
20 PHYLIP "PHYLIP" -> "-type=PHYLIP ";
21
22
23 output_opts:horizontal "Output options" -> "-dev="out_type minor_out_opts;
24 minor_out_opts -> numdef split ruler cons "-"endings;
25
26 out_type :double "Output file type" -> PS | EPS | HPGL | ! RTF | ANSI | VT100 | ReGIS1 | ReGIS2 | LJ250 | ASCII | FIG | PICT | HTML;
27 PS "Postscript" -> "1 ";
28 EPS "Encapsulated Postscript" -> "2 ";
29 HPGL "HPGL" -> "3 ";
30 RTF "RTF( Rich Text Format)" -> "4 ";
31 ANSI "ANSI-screen (PC-version)" -> "6 ";
32 VT100 "VT100-screen (DEC-version)" -> "7 ";
33 ReGIS1 "ReGIS-screen (25 lines each)" -> "8 ";
34 ReGIS2 "ReGIS-file (without breaks)" -> "9 ";
35 LJ250 "LJ250-printer file" -> "a ";
36 ASCII "ASCII file" -> "b ";
37 FIG "FIG file (for XFIG)" -> "c ";
38 PICT "PICT file" -> "d ";
39 HTML "HTML file" -> "e ";
40
41 numdef "use default numbering" -> "-numdef " | @;
42 split "split pages into files" -> "-split " | !@;
43 ruler "print ruler" -> "-ruler " | @;
44 cons "create consensus line" -> "-cons " | @;
45
46 endings "Output line endings" -> @list("dos", "mac", "unix")=3;
47
48 buttons :horizontal -> @action(boxshade)="Run boxshade" @close="Cancel" @preview(start,"Lucidatypewriter",400,100,"Close")="Preview";

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